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This includes a general correction in the code (now using the X509V3_CTX_REPLACE flag) and adding a prominent clarification in the documentation: If multiple entries are processed for the same extension name, later entries override earlier ones with the same name. This is due to an RFC 5280 requirement - the intro of its section 4.2 says: A certificate MUST NOT include more than one instance of a particular extension. Reviewed-by: Tomas Mraz <tmraz@fedoraproject.org> (Merged from https://github.com/openssl/openssl/pull/13614)