By default, cqtdeployer will create one zip arhive.
If you want create multi package destribution, you should use Controll of packages options
To create a new package, use the -targetPackage [package; tar1] option
cqtdeployer create zip arhive for each packages.
Where:
package - it is package name
tar1 - it is name of the target that should be included in this package.